PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015901879.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 265aa    MW: 28368.7 Da    PI: 5.7837
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015901879.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.91.7e-1597146155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+ykG+r ++ +g+Wv+eIr+p++   ++r++lg+f t+++Aa a++ a+++l+g
  XP_015901879.1  97 SRYKGIR-CR-SGKWVSEIREPRK---TTRIWLGTFPTPDMAAVAYDVAALALKG 146
                     79****9.55.6*********843...5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.3E-897146IPR001471AP2/ERF domain
CDDcd000183.10E-2797154No hitNo description
SuperFamilySSF541717.85E-1897155IPR016177DNA-binding domain
SMARTSM003807.8E-2898160IPR001471AP2/ERF domain
PROSITE profilePS5103219.91598154IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-2598155IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MSDSDTPTNV RQVVDQPNVH LPSLPYLDFP PHPFLSLDPT LPPPPFPLPP APPPPPPPPP  60
SSSSTSSALN PNLHHLQHHH THPNTNSMAS SSSGKHSRYK GIRCRSGKWV SEIREPRKTT  120
RIWLGTFPTP DMAAVAYDVA ALALKGNDAV LNFPSLVGKY PVPDSSSAAD IRKAATAAAA  180
AKMADWREGM GGNSEPSSKK DDGTLSGDRL SLSGGEFVDE EELFGMPNLL VDMAEGMLVS  240
PPRMSSSDDS PGNYSDGVES LWNYS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015867319.10.0PREDICTED: ethylene-responsive transcription factor ERF027-like
RefseqXP_015901879.10.0PREDICTED: ethylene-responsive transcription factor ERF027-like
SwissprotQ9FJ901e-49ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A0A0KKC46e-60A0A0A0KKC4_CUCSA; Uncharacterized protein
STRINGPOPTR_0003s12120.12e-59(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.15e-34ERF family protein